Uses of Class
phylonet.app.tool.APhyloTool

Packages that use APhyloTool

phylonet.app.controller
phylonet.app.tool.charnet
phylonet.app.tool.cmpnets
phylonet.app.tool.countcoal
phylonet.app.tool.inferst
phylonet.app.tool.lca
phylonet.app.tool.mast
phylonet.app.tool.netpars
phylonet.app.tool.recomp
phylonet.app.tool.rf
phylonet.app.tool.riatahgt
phylonet.app.view

Uses of APhyloTool in phylonet.app.controller

Methods in phylonet.app.controller with parameters of type APhyloTool

void	PhyloNetAppController.addTool(APhyloTool tool) Adds the supplied tool to this controller's view and this controller's list of managed tools.

Uses of APhyloTool in phylonet.app.tool.charnet

Subclasses of APhyloTool in phylonet.app.tool.charnet

class

CharnetTool Represents the CHARNET tool.

Uses of APhyloTool in phylonet.app.tool.cmpnets

Subclasses of APhyloTool in phylonet.app.tool.cmpnets

class

CmpnetsTool Represents the CMPNETS tool.

Uses of APhyloTool in phylonet.app.tool.countcoal

Subclasses of APhyloTool in phylonet.app.tool.countcoal

class

CountCoalTool Represents the COUNTCOAL tool.

Uses of APhyloTool in phylonet.app.tool.inferst

Subclasses of APhyloTool in phylonet.app.tool.inferst

class

InferSTTool Represents the INFER_ST tool.

Uses of APhyloTool in phylonet.app.tool.lca

Subclasses of APhyloTool in phylonet.app.tool.lca

class

LCATool Represents the LCA tool for calculating the Least Common Ancestor of a set of nodes belonging to a certain tree.

Uses of APhyloTool in phylonet.app.tool.mast

Subclasses of APhyloTool in phylonet.app.tool.mast

class

MastTool Represents the MAST tool.

Uses of APhyloTool in phylonet.app.tool.netpars

Subclasses of APhyloTool in phylonet.app.tool.netpars

class

NetparsTool Represents the NETPARS tool.

Uses of APhyloTool in phylonet.app.tool.recomp

Subclasses of APhyloTool in phylonet.app.tool.recomp

class

RecompTool Represents the RECOMP tool.

Uses of APhyloTool in phylonet.app.tool.rf

Subclasses of APhyloTool in phylonet.app.tool.rf

class

RFTool Represents the RF tool.

Uses of APhyloTool in phylonet.app.tool.riatahgt

Subclasses of APhyloTool in phylonet.app.tool.riatahgt

class

RIATAHGTTool Represents the RIATA-HGT tool.

Uses of APhyloTool in phylonet.app.view

Methods in phylonet.app.view with parameters of type APhyloTool

void	PhyloNetAppView.addTool(APhyloTool tool) Creates a new menu item for the supplied tool and adds it to this view's "Calculate" menu.